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Protein Alignment CAH4 and cahz

DIOPT Version :9

Sequence 1:	NP_651298.1	Gene:	CAH4 / 42965	FlyBaseID:	FBgn0039235	Length:	279	Species:	Drosophila melanogaster
Sequence 2:	NP_571185.1	Gene:	cahz / 30331	ZFINID:	ZDB-GENE-980526-39	Length:	260	Species:	Danio rerio

Alignment Length:	254	Identity:	80/254 - (31%)
Similarity:	115/254 - (45%)	Gaps:	32/254 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    35 GERQSPIALWSCNAITCNVPKLKFLNYHKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISTEG 99
            |.|||||.:....|  .:.|.||.|..........|::|||.:..:..   ||....|.......
Zfish    25 GPRQSPIDIVPTQA--QHDPSLKHLKLKYDPATTKSILNNGHSFQVDF---VDDDNSSTLAGGPI 84

  Fly   100 QQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNASYKSNKEAGLQPNGFAVLALFIR- 163
            ..::...|.||||||:..|||||.:.|..:..|:|:||.|..|.:..||..:|:|.||:.:|::
Zfish    85 TGIYRLRQFHFHWGSSDDKGSEHTIAGTKFPCELHLVHWNTKYPNFGEAASKPDGLAVVGVFLKI 149

  Fly   164 NLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASID-------SQKYFTYQGSLTT 221
            ...:|.::           ..:..|||.    .|...|..||:.|       |..|:||:|||||
Zfish   150 GAANPRLQ-----------KVLDALDDI----KSKGRQTTFANFDPKTLLPASLDYWTYEGSLTT 199

  Fly   222 PPCAEAVIWFVFPTPLDV-PKELWKHFWQLRDSRDQR---VLNTYRELQDGHDRPVYRS 276
            ||..|:|.|.|...|:.| |.::.|....|..|..:.   :::.||..|....|.|..|
Zfish   200 PPLLESVTWIVLKEPISVSPAQMAKFRSLLFSSEGETPCCMVDNYRPPQPLKGRKVRAS 258

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.