DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH4 and Ptprg

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_033007.2 Gene:Ptprg / 19270 MGIID:97814 Length:1442 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200
PtprgNP_033007.2 PLN02179 17..272 CDD:177835
alpha_CARP_receptor_like 67..319 CDD:239396
FN3 348..438 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..480
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..726
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 769..788
PTPc 844..1115 CDD:214550
PTPc 873..1115 CDD:238006
Substrate binding. /evidence=ECO:0000250 1057..1063
PTPc 1147..1405 CDD:214550
PTPc 1174..1405 CDD:238006
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1412..1442
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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