DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and Ptprg

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_063130015.1 Gene:Ptprg / 171357 RGDID:620774 Length:1475 Species:Rattus norvegicus


Alignment Length:263 Identity:72/263 - (27%)
Similarity:120/263 - (45%) Gaps:28/263 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NVKC-GERQSPIALWSCNA-ITCNVPKLKFLNYHKSLCDPLSVINNGLTV--LMRIPKTVDGSRP 91
            :|.| |..||||.:...:| :.....:|:...:.....:...:.|.|.||  |::....|.|:  
  Rat   108 SVSCGGSHQSPIDILDHHARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGA-- 170

  Fly    92 SLCISTEGQQVFEADQLHFHWG-SALSKGSEHCLDGNYYDGEVHIVHKNASYKSNKEAGLQPNG- 154
                ...|:  |:|:::.|||| |..|.||||.::|..:..|:.|...|.....:.:..:..|. 
  Rat   171 ----GLPGR--FKAEKVEFHWGHSNGSAGSEHSVNGRRFPVEMQIFFYNPDDFDSFQTAISENRI 229

  Fly   155 FAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLF-ASIDSQKYFTYQGS 218
            ...:|:|.:  ..|. :..|::.|...:..:...:....| |...|:||. ||:.|  |:.|.||
  Rat   230 IGAMAIFFQ--VSPR-DNSALDPIIHGLKGVVHHEKETFL-DPFVLRDLLPASLGS--YYRYTGS 288

  Fly   219 LTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQ-------RVLNTYRELQDGHDRPVYRS 276
            ||||||:|.|.|.||..|:.:.....:.|:.:..:..|       .:.|.:|..|..:||.|.:|
  Rat   289 LTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQALNDRVVSKS 353

  Fly   277 KAK 279
            ..:
  Rat   354 AVR 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 68/251 (27%)
PtprgXP_063130015.1 None

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