DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and CARPA

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_061501342.1 Gene:CARPA / 1272307 VectorBaseID:AGAMI1_011182 Length:341 Species:Anopheles gambiae


Alignment Length:260 Identity:70/260 - (26%)
Similarity:124/260 - (47%) Gaps:37/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WNVKC--GERQSPIALWSCNAITCNV--PKLKFLNYHKSL-CDPLSVI----NNGLTVLMRIPKT 85
            ||: |  |.|||||          ||  .||.|..|.:|| .|...:.    |.|.:::.|:.| 
Mosquito    48 WNM-CNKGRRQSPI----------NVEPEKLLFDPYLRSLHIDKHKISGTLHNTGQSLVFRVEK- 100

  Fly    86 VDGSRPSLCISTEGQQV--FEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNAS-YKSNKE 147
              .::..:.||: |...  ::.::::||:|:..::||||.:.|..:.||:.:...|.. |.:..|
Mosquito   101 --DTKQHVNISS-GPLAYRYQFEEIYFHYGTDNNQGSEHHIHGYSFPGEIQLYGFNKELYHNMSE 162

  Fly   148 AGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASIDSQKY 212
            |..:..|...::|.::..:.||   |.:.:|....:.:.....|.|:. .::|:.|..  ::::|
Mosquito   163 AQHKAQGIVGISLMLQIGDTPN---PELRIITSAFNKVLYKGSSTPIR-HISLRSLLP--NTEQY 221

  Fly   213 FTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQR----VLNTYRELQDGHDRPV 273
            .||:||.|.|.|.|:.:|.:...|:.:.|:......:|....:|.    :.|..|.||..|.|.|
Mosquito   222 MTYEGSTTHPGCWESTVWIILNKPIYITKQELYALRKLMQGSEQTPKAPLGNNARPLQALHHRTV 286

  Fly   274  273
            Mosquito   287  286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 67/253 (26%)
CARPAXP_061501342.1 None

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