DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and CA5B

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_009151.1 Gene:CA5B / 11238 HGNCID:1378 Length:317 Species:Homo sapiens


Alignment Length:260 Identity:79/260 - (30%)
Similarity:129/260 - (49%) Gaps:43/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GERQSPIAL-WSCNAITCNVPKLK--FLNYHKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCIS 96
            |:|||||.: |..:...   |.||  .::|..:.|  |.|.|||.:.|:....:.|.|     :.
Human    61 GDRQSPINIRWRDSVYD---PGLKPLTISYDPATC--LHVWNNGYSFLVEFEDSTDKS-----VI 115

  Fly    97 TEG--QQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNA-SYKSNKEAGLQPNGFAVL 158
            ..|  :..:...|.|||||:..:.||||.:|...:..|:|:||.|| .:::.::|.|:.||.||:
Human   116 KGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCFPAELHLVHWNAVRFENFEDAALEENGLAVI 180

  Fly   159 ALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCP-LEDSMALQDLFASIDSQ-------KYFTY 215
            .:|::              :.|....:.||.|:.| ::...||.: |.|.|..       .|:||
Human   181 GVFLK--------------LGKHHKELQKLVDTLPSIKHKDALVE-FGSFDPSCLMPTCPDYWTY 230

  Fly   216 QGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQL----RDSRDQRVLNTYRELQDGHDRPVYRS 276
            .|||||||.:|:|.|.:...|::|..:..:.|..|    ...:::|:::.:|.||...:|.|..|
Human   231 SGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRTVRSS 295

  Fly   277  276
            Human   296  295

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 77/256 (30%)
CA5BNP_009151.1 alpha_CA 61..296 CDD:412109 79/260 (30%)