DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and Car10

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001414698.1 Gene:Car10 / 100360015 RGDID:2322930 Length:328 Species:Rattus norvegicus


Alignment Length:286 Identity:74/286 - (25%)
Similarity:131/286 - (45%) Gaps:45/286 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVARSFAPINSGTRSHFGFNYDKQGRDWNV-KCGERQSPIALWSCNAITCNVPKLKFLNYHKSLC 66
            :|..||.|:    .|.:|.    ....||: ..|:||||:     |..|.::....||.      
  Rat    38 VVQGSFVPV----PSFWGL----VNSAWNLCSVGKRQSPV-----NIETSHMIFDPFLT------ 83

  Fly    67 DPLSVINNGLTVLMRIPKTVDGSRPSLCISTE-------GQQVF--EADQLHFHWGSALSKGSEH 122
             ||.:...|..|...:..|  |...||.:..|       |...:  ..:::..|:||..|:||||
  Rat    84 -PLRINTGGRKVSGTMYNT--GRHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDSQGSEH 145

  Fly   123 CLDGNYYDGEVHIVHKNAS-YKSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQ--VSS 184
            .|:|..:.|||.::|.|.. |.:..||...|||..|:::||:..:..|   |.:|.:..:  ::.
  Rat   146 LLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSN---PFLNRMLNRDTITR 207

  Fly   185 ITKLDDSCPLEDSMALQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQ 249
            ||..:|:..|: .:.:::|:.  ::..:.||.||:|.|||.|...|.:...|:.:.:........
  Rat   208 ITYKNDAYLLQ-GLNIEELYP--ETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMHSLRL 269

  Fly   250 LRDSRDQRVL----NTYRELQDGHDR 271
            |..::..::.    :.:|.:|..::|
  Rat   270 LSQNQPSQIFLSMSDNFRPVQPLNNR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 66/253 (26%)
Car10NP_001414698.1 None

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