DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7006 and Nip7

DIOPT Version :10

Sequence 1:NP_651296.1 Gene:CG7006 / 42963 FlyBaseID:FBgn0039233 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_620202.1 Gene:Nip7 / 192180 RGDID:620069 Length:180 Species:Rattus norvegicus


Alignment Length:179 Identity:117/179 - (65%)
Similarity:145/179 - (81%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKRLSDERAKILFEHLSKYIGTNVKHLIDRPDGTYCFREHKDRVYYVSERILKLSECFGYKQLVC 65
            |:.|::|..:::||.::||||.|::.|:||||||||||.|.||||||||.||||:......:||.
  Rat     1 MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEMILKLAANISGDKLVS 65

  Fly    66 VGTCFGKFSKTNKLKFHITALYYLAPYAQYKVWVKPSFEQQFLYGNHIPKTGLGRITENAGQYQG 130
            :|||||||:||:|.:.|:|||.:|||||:||||:||..||.||||||:.|:||||||||..||||
  Rat    66 LGTCFGKFTKTHKFRLHVTALDFLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQG 130

  Fly   131 VVVYSMNDLPLGFGVLARSTTDCKTADPMTTVCFHQSDIGEYIRAEDTL 179
            ||||||.|:||||||.|:||.||:..|||..|.|||:|||||||.|:||
  Rat   131 VVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYIRHEETL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7006NP_651296.1 Nip7_N_euk 4..88 CDD:409283 49/83 (59%)
PUA_Nip7-like 95..172 CDD:409293 55/76 (72%)
Nip7NP_620202.1 N-terminal domain. /evidence=ECO:0000250 1..92 52/90 (58%)
Nip7_N_euk 2..88 CDD:409283 49/85 (58%)
C-terminal domain. /evidence=ECO:0000250 93..180 63/87 (72%)
PUA_Nip7-like 95..172 CDD:409293 55/76 (72%)

Return to query results.
Submit another query.