DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and RAB33B

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_011530601.1 Gene:RAB33B / 83452 HGNCID:16075 Length:277 Species:Homo sapiens


Alignment Length:172 Identity:68/172 - (39%)
Similarity:116/172 - (67%) Gaps:8/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFR-T 72
            :|::|:|||||||||:.:|:|..::.|...:|||:||:::.:.:||..||:|:|||||||||| :
Human    82 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKS 146

  Fly    73 LTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQEN-ASPDVVKVLAGNKCEC-SATQRMVDKE 135
            :...|||....::.:||:||:.|:::|..|:...::: .:.|:.::|.||||:. ||.|  |..:
Human   147 MVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQ--VPTD 209

  Fly   136 RGEKIAENFDMPFFEVSCKS---NINIEDAFLSLARKIREQR 174
            ..:|.|:...||.||.|.|:   |.::|..|::||.|::..:
Human   210 LAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 67/166 (40%)
RAB33BXP_011530601.1 Rab33B_Rab33A 80..249 CDD:133315 68/168 (40%)

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