DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and RABE1e

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:671 Identity:109/671 - (16%)
Similarity:194/671 - (28%) Gaps:206/671 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 SSGIKSSSGTDDNKNNNNKSNALSDTDSSSSTEKIVNRKPFTPKTLKKMADFSRLDSRSAPVTIG 440
            :.|.:....:.|..::.|.:.|:.:..:|...:   .|..|...:|        :.:....::|.
plant   237 AGGYRCEVSSKDKFDSCNFNLAVHEVSTSGEVD---IRAAFRRTSL--------VGAAKRRISIA 290

  Fly   441 SNQDSDEDATLNEMMGKFDESYHYEKETDILSCSDSDPTDCPTDIDTGQDAGDECDTDDLLDLDF 505
            .:.|..|:|      |:.|.|       .:|...|::|.         |.|..:.|..|:|    
plant   291 ISGDGAEEA------GELDFS-------ALLKKRDNEPK---------QGAEPDVDVWDIL---- 329

  Fly   506 IDTGSVQEVPDKETYRHTTSCSIHQFPERKASCKQQRIQRSKRSNESGGGSKRRKKLVRTRKKSA 570
                  ::.|..|                     .::|.......:..|..||.||:.:..|||.
plant   330 ------KKAPPSE---------------------YEKIAFQYGITDLRGLLKRLKKMKKEEKKSE 367

  Fly   571 ADHSALSVGSGAGDSSAVVSRGCRSLGGTPVSLRRNQQDQELRTPTRGSPLTNRCNSLTFTEVHS 635
            |....:       |.:..:.:|.:......|:    ..|.|::....|..:....:...|..:. 
plant   368 AFLKKM-------DPAYQIDKGQKMKLVVEVA----NPDAEVKWLKNGQEIRVSGSKYIFESIG- 420

  Fly   636 LHSRILAISESEKALLRADLEADVKYKQLIHEAESILFSMKSNSSICIKDLATVPPPLPPREPQP 700
             :.|||.|:       ...|..|..|:.:|.|.:            |..:|..       |||..
plant   421 -NKRILTIN-------NCSLADDAAYQCVIGEEK------------CFTELFV-------REPPV 458

  Fly   701 PPTPSLSKDTPVTSTTISSPRRVCNPPANKR-----VEMLR------NCEADLKRELAKTCSQKC 754
            ....||.....:....:.....|....|..:     ||:.|      ..:.|.|:..........
plant   459 QILHSLEDQMVMVGERVEFECEVSEEGAQVKWEKDGVELTREETFKYRFKKDGKKHFLIINETTL 523

  Fly   755 TDGAGNPAELNPAEGV----IVNKRLEVLRYETSCSLSAPNSP----------------KNTRVL 799
            .||.....:.|..|.|    :..|:||||:.....::.|....                ||.:.:
plant   524 EDGGNYKVKTNGGESVAELMVQEKQLEVLQDVADLTVKAKEQAVFKCEVSDETVTGIWVKNGKEV 588

  Fly   800 LPRK----THVS----------------------------------------NFIHHQARPPCSP 820
            :|..    ||:.                                        :|:..|..|....
plant   589 IPNNRIKITHIGRVHKLTIDDVVPQDEGDYSFIPNGFAFSLSAKLHFMEVKIDFVPRQEPPKIKL 653

  Fly   821 EALA-----------NDLKQSANLSPPPPPPRRMIPKSPTIMRRRFRSQS-PHLNIESDSD-SDE 872
            :.::           |.|:....:|..|.|....:.....|.:...|::| .|.::..|.| ..|
plant   654 DCMSQCADTIIVVAGNKLRLDVPISGDPAPTVVWMKGDKVIEQTPVRTESEAHHDLYRDVDLISE 718

  Fly   873 VSRNLDCKAHGK---------------SYRTGTSNNNNKENLVINPQPATFQQPTVKPVVGKQMN 922
            |...:..:.|..               :|.....|...::...||.:......|...|.:.....
plant   719 VDGRVHVETHADHCVFIIEGAEKSDEGAYTVLVKNEAGEDKANINVKVIEVPDPPESPKISNIGE 783

  Fly   923 NFRHTIHGPAFTNGEDGQNGY 943
            :|......|...:|.....||
plant   784 DFCTVQWDPPKYDGGQPVLGY 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659
Blue background indicates that the domain is not in the aligned region.

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