DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and RABA5b

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_187397.1 Gene:RABA5b / 819929 AraportID:AT3G07410 Length:217 Species:Arabidopsis thaliana


Alignment Length:208 Identity:71/208 - (34%)
Similarity:122/208 - (58%) Gaps:8/208 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|::::|||.|||:.::.|:..:::.....:|||::|:.:|:.::|..:|.||||||||||||.:
plant    13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRAV 77

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |:||||||.|.|::||:|..:::.::..||:.:..:....|.::|.||||:.... |.|..|.|:
plant    78 TSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDI-RAVSVEEGK 141

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERR---GDNFDNDESKDKKSPGSNGLGTF 200
            .:||...:.|.|.|.....|::.||..:.|:|.....|:   .|.:..:.|.::.|..:|..|:.
plant   142 ALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSDAYKAELSVNRVSLVNNQDGSE 206

  Fly   201 SLGSLSGENRCTC 213
            |    |..|...|
plant   207 S----SWRNPSCC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 60/160 (38%)
RABA5bNP_187397.1 Rab11_like 10..174 CDD:206660 60/161 (37%)

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