DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab35a

DIOPT Version :9

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001373674.1 Gene:rab35a / 796454 ZFINID:ZDB-GENE-131030-1 Length:195 Species:Danio rerio


Alignment Length:168 Identity:76/168 - (45%)
Similarity:116/168 - (69%) Gaps:2/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||.|:...:|:|::|||.|||:.::.|:.|..:..:||:|||:|||.:.:.::|..:||||||||
Zfish     1 MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|:.||||..|::::||||:.||:.|:..||..|.:|.. ||.::|.|||.:..|: :
Zfish    66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPAS-K 128

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLAR 168
            :|:....:|.||...:..||.|.|.|:|:||..|:|.|
Zfish   129 VVETNDAQKFAEQMGIRLFETSAKENLNVEDVSLALQR 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 73/160 (46%)
rab35aNP_001373674.1 P-loop_NTPase 3..176 CDD:422963 74/166 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1149105at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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