DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab35a

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_073807212.1 Gene:rab35a / 796454 ZFINID:ZDB-GENE-131030-1 Length:201 Species:Danio rerio


Alignment Length:199 Identity:80/199 - (40%)
Similarity:129/199 - (64%) Gaps:11/199 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||.|:...:|:|::|||.|||:.::.|:.|..:..:||:|||:|||.:.:.::|..:||||||||
Zfish     1 MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|:.||||..|::::||||:.||:.|:..||..|.:|.. ||.::|.|||.:..|: :
Zfish    66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPAS-K 128

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSL------ARK---IREQRERRGDNFDNDES 186
            :|:....:|.||...:..||.|.|.|:|:||.|..:      |||   .::|::::.:.....:|
Zfish   129 VVETNDAQKFAEQMGIRLFETSAKENLNVEDMFNCITELVLKARKESVAKQQQQQQSEVVKLSKS 193

  Fly   187 KDKK 190
            ..:|
Zfish   194 NKRK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 74/169 (44%)
rab35aXP_073807212.1 None

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