DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab35

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_937806.1 Gene:Rab35 / 77407 MGIID:1924657 Length:201 Species:Mus musculus


Alignment Length:200 Identity:78/200 - (39%)
Similarity:125/200 - (62%) Gaps:12/200 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||.|:...:|:|::|||.|||:.::.|:.|..:..:||:|||:|||.:.:.::|..:||||||||
Mouse     1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|:.||||..|::::||||:.||:.|:..||..|.:|.. ||.::|.|||.: ...::
Mouse    66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKND-DPERK 128

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKI---------REQRERRGDNFD-NDE 185
            :|:.|...|.|....:..||.|.|.|:|:|:.|..:...:         ::|::::.|... ...
Mouse   129 VVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKN 193

  Fly   186 SKDKK 190
            ||.||
Mouse   194 SKRKK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 69/160 (43%)
Rab35NP_937806.1 Rab35 3..201 CDD:133310 75/197 (38%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q15286 30..42 4/11 (36%)
Effector region. /evidence=ECO:0000250 37..45 5/7 (71%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q15286 64..80 12/15 (80%)

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