DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab30

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_083770.2 Gene:Rab30 / 75985 MGIID:1923235 Length:203 Species:Mus musculus


Alignment Length:173 Identity:76/173 - (43%)
Similarity:113/173 - (65%) Gaps:2/173 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68
            |:...:|::::|::.|||||:|.|:....:.....:|||:||..|.:.::|..:|||||||||||
Mouse     5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69

  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVD 133
            |||::|.:|||.|..::|.||:|..||:..|..|||.|::.||..|:.||.|||.:. |.:|.|.
Mouse    70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDL-AERREVS 133

  Fly   134 KERGEKIAENFDMPFFEVSCKSNINIEDAFLSLA-RKIREQRE 175
            ::|.|:.:|..||.:.|.|.|.:.|:|..||.|| |.|.|.|:
Mouse   134 QQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQ 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 72/161 (45%)
Rab30NP_083770.2 Rab30 3..171 CDD:133314 73/166 (44%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 10/15 (67%)

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