DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab9a

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001229903.1 Gene:rab9a / 751756 ZFINID:ZDB-GENE-060825-293 Length:201 Species:Danio rerio


Alignment Length:193 Identity:69/193 - (35%)
Similarity:104/193 - (53%) Gaps:13/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74
            ||::|||..|||:.:::||...|:......|||::|..|.:.:||..:.|||||||||||||:|.
Zfish     9 KVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIWDTAGQERFRSLR 73

  Fly    75 TAYYRGAMGILLMYDVTNLESYNNLSYWLR------NIQENAS-PDVVKVLAGNKCECSATQRMV 132
            |.:|||:...||.:.|.:.:|::||..|.:      :::|..| |.||   .|||.:.|  :|.|
Zfish    74 TPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVV---LGNKLDVS--ERQV 133

  Fly   133 DKERGEK-IAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGS 194
            ..|..:: ..|:...|:||.|.|...|:..||....|::....:|.......|.....:.|.|
Zfish   134 SSEEAQEWCMESGGYPYFETSAKDATNVAVAFEEAVRRVLSLEDRHEHLIPTDTVNLHRKPRS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 65/167 (39%)
rab9aNP_001229903.1 Rab9 4..172 CDD:206697 65/167 (39%)

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