DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX4 and Rab14

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_080973.1 Gene:Rab14 / 68365 MGIID:1915615 Length:215 Species:Mus musculus


Alignment Length:205 Identity:79/205 - (38%)
Similarity:122/205 - (59%) Gaps:1/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|.:::||..|||:|::|::.::|:......|||::|..::|.:.|..|||||||||||||||.:
Mouse    12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAV 76

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |.:|||||.|.|::||:|...:||:||.||.:.:...:|:.|.:|.|||.:..| ||.|..|..:
Mouse    77 TRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEA-QRDVTYEEAK 140

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSNGLGTFSLG 203
            :.||...:.|.|.|.|:..|:|||||..|:||.:..:....:.:..||..:..|.:...|..:..
Mouse   141 QFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSE 205

  Fly   204 SLSGENRCTC 213
            .......|.|
Mouse   206 PQPQREGCGC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 71/160 (44%)
Rab14NP_080973.1 Rab14 10..175 CDD:133322 73/163 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 42..47 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 68..77 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..215 4/26 (15%)

Return to query results.
Submit another query.