DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab2a

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001398756.1 Gene:Rab2a / 59021 MGIID:1928750 Length:216 Species:Mus musculus


Alignment Length:153 Identity:63/153 - (41%)
Similarity:108/153 - (70%) Gaps:1/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|.:::||:.|||:|::.::.|:::...:..|||::|..::|.:||..||||||||||||.||::
Mouse     7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSI 71

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |.:|||||.|.||:||:|..:::|:|:.||.:.:::::.::|.:|.|||.:.. ::|.|.||.||
Mouse    72 TRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGE 135

  Fly   139 KIAENFDMPFFEVSCKSNINIED 161
            ..|....:.|.|.|.|:..|:|:
Mouse   136 AFAREHGLIFMETSAKTASNVEE 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 63/153 (41%)
Rab2aNP_001398756.1 Required for interaction with PRKCI. /evidence=ECO:0000250 2..19 4/11 (36%)
Rab2 3..158 CDD:206658 62/151 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 6/8 (75%)

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