DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and RAB2A

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_002856.1 Gene:RAB2A / 5862 HGNCID:9763 Length:212 Species:Homo sapiens


Alignment Length:200 Identity:73/200 - (36%)
Similarity:130/200 - (65%) Gaps:1/200 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|.:::||:.|||:|::.::.|:::...:..|||::|..::|.:||..||||||||||||.||::
Human     7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSI 71

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |.:|||||.|.||:||:|..:::|:|:.||.:.:::::.::|.:|.|||.:.. ::|.|.||.||
Human    72 TRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGE 135

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSNGLGTFSLG 203
            ..|....:.|.|.|.|:..|:|:||::.|::|.|:.:....:.:|:.:..|..|..........|
Human   136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAG 200

  Fly   204 SLSGE 208
            :..|:
Human   201 NQGGQ 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 66/160 (41%)
RAB2ANP_002856.1 PLN03108 1..188 CDD:178655 70/181 (39%)
Required for interaction with PRKCI. /evidence=ECO:0000269|PubMed:14570876 2..19 4/11 (36%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 6/8 (75%)

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