DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RabX4 and rab44

DIOPT Version :9

Sequence 1:	NP_733043.1	Gene:	RabX4 / 42960	FlyBaseID:	FBgn0051118	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	XP_689291.6	Gene:	rab44 / 560799	ZFINID:	ZDB-GENE-040724-117	Length:	2402	Species:	Danio rerio

Alignment Length:	187	Identity:	64/187 - (34%)
Similarity:	112/187 - (59%)	Gaps:	3/187 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERF 70
            |..:.|:::|:|.||||..:.|:.:.::.:.|.||||:|...:.:.|....:|||||||||||||
Zfish  2215 VVQFNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIGVDTFVQTVELPDRTVKLQIWDTAGQERF 2279

  Fly    71 RTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKE 135
            .::||..:..|.|:||||::|..:|:.::..|:...:|.|..|||.:|.|||.:  :..|.|..:
Zfish  2280 HSITTQVFHKAEGLLLMYEITCSKSFISIRDWISQARERAQDDVVMMLLGNKND--SVNREVQIQ 2342

  Fly   136 RGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFD-NDESKDKKS 191
            .|..:|..:::.|.|.|..:..|:.::..:||..:.:::.:|.::.. ..|.:.|||
Zfish  2343 EGADLAREYNIHFMECSAANGANVSESMRTLAELLVQRKRKREEHTTLRREPQQKKS 2399

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RabX4	NP_733043.1	RAB	9..170	CDD:197555	58/160 (36%)
rab44	XP_689291.6	EIN3	<1419..>1534	CDD:296674
		RAB	2218..2380	CDD:197555	58/163 (36%)
		Rab	2218..2375	CDD:206640	57/158 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900