DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab19

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_073798761.1 Gene:rab19 / 555645 -ID:- Length:271 Species:Danio rerio


Alignment Length:219 Identity:81/219 - (36%)
Similarity:126/219 - (57%) Gaps:23/219 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68
            ||:  :|::::|||||||||::..:...:..:...:|||:||..:.|::||..:|:|:|||||||
Zfish    67 DFL--FKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWDTAGQE 129

  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVD 133
            ||||:|.:|||.|.|.::.||::..:::::|.:|::.:::..:..:|.||.||||:..| ||.|.
Zfish   130 RFRTITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQYGAASLVLVLIGNKCDLEA-QRQVL 193

  Fly   134 KERGEKIAENFD-MPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSNGL 197
            .|....:||... :...|.|.|.:.|||:||..:|   ||...|.|.....|...|  ||     
Zfish   194 FEDACTLAERSGALAALETSAKHHHNIEEAFQLMA---RELLVRHGGIHYQDNQSD--SP----- 248

  Fly   198 GTFSLGS----LSGE----NRCTC 213
             |..|.|    :.||    ..|.|
Zfish   249 -TVYLHSDSHPIEGEQLEKRSCDC 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 64/161 (40%)
rab19XP_073798761.1 None

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