DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab12

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001018466.1 Gene:rab12 / 553657 ZFINID:ZDB-GENE-050522-555 Length:235 Species:Danio rerio


Alignment Length:167 Identity:72/167 - (43%)
Similarity:108/167 - (64%) Gaps:4/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ATYK--VLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQER 69
            |.||  |:::|...||||.::.|:.|:.:.:...||:|:|||.|.:.|.|..|:|||||||||||
Zfish    32 ADYKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQER 96

  Fly    70 FRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDK 134
            |.::|:||||||.||:|:||:|..|::.:|..|::.|.:.||.|...:|.|||.:|. :.|.:.:
Zfish    97 FNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCE-SDRAISR 160

  Fly   135 ERGEKIAENFD-MPFFEVSCKSNINIEDAFLSLARKI 170
            ::.|:.|.... |.|.|.|.|.|.|:::.||.|...|
Zfish   161 QQAERFASRISGMRFCEASAKDNFNVDEIFLKLVDDI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 70/163 (43%)
rab12NP_001018466.1 Rab12 36..235 CDD:206699 69/163 (42%)

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