Protein Alignment RabX4 and Rab43

DIOPT Version :9

• Sequence 1: NP_733043.1
• Gene: RabX4 / 42960
• FlyBaseID: FBgn0051118
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_001019502.1
• Gene: Rab43 / 500249
• RGDID: 1565300
• Length: 210
• Species: Rattus norvegicus
• Alignment Length: 192
• Identity: 71/192 - (36%)
• Similarity: 120/192 - (62%)
• Gaps: 11/192 - (5%)

  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68
            ||:  :|::::||::|||||:|.|:....:.....||||:||..|.:.:.|..:|||||||||||
  Rat    14 DFL--FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 76

  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVD 133
            ||||:|.:|||.|.|.:|.||::...::.::.:|:.::::.|..::|::|.|||.:. |..|.|.
  Rat    77 RFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDL-ADLREVP 140

  Fly   134 KERGEKIAENFD-MPFFEVSCKSNINIEDAFLSLARKIREQR------ERRGDNFDNDESKD 188
            ....:.:||::| :...|.|.|.:.|:|:||..:|.::..:.      |:..|:...| |||
  Rat   141 LAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMRHGGPMFSEKNTDHIQLD-SKD 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RabX4	NP_733043.1	RAB	9..170	CDD:197555	63/161 (39%)
Rab43	NP_001019502.1	Rab19	14..178	CDD:133267	65/166 (39%)
		Effector region. /evidence=ECO:0000250	45..53		4/7 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010