DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab35b

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001003548.1 Gene:rab35b / 445154 ZFINID:ZDB-GENE-040801-62 Length:201 Species:Danio rerio


Alignment Length:200 Identity:79/200 - (39%)
Similarity:125/200 - (62%) Gaps:12/200 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||.|:...:|:|::|||.|||:.::.|:.|..:..:||:|||:|||.:.:.|:|..:||||||||
Zfish     1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|:.||||..|::::||||:.||:.|:..||..|.:|.. ||.::|.|||.: ....:
Zfish    66 GQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKND-DPNSK 128

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKI---------REQRERRGDNFD-NDE 185
            :|:....:|.||...:..||.|.|.|:|:|:.|..:...:         ::|::::.|... ...
Zfish   129 VVETNDAQKFAEQMGISLFETSAKENVNVEEMFNCITELVLRAKKESVAKQQQQQQNDVIKLKQN 193

  Fly   186 SKDKK 190
            ||.||
Zfish   194 SKRKK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 70/160 (44%)
rab35bNP_001003548.1 P-loop containing Nucleoside Triphosphate Hydrolases 3..201 CDD:476819 76/197 (39%)

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