DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX4 and Rab44

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001351777.1 Gene:Rab44 / 442827 MGIID:3045302 Length:973 Species:Mus musculus


Alignment Length:168 Identity:67/168 - (39%)
Similarity:100/168 - (59%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            |.|:.|||||||||..:|....:.:.....:|:|:||:.|.:.:|.....||:||||||||:.:|
Mouse   786 YHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSL 850

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |....|.|.|::||||||:.||:.::.|||..:|:.....|..||.|||.:|. .:|.|..|.|.
Mouse   851 TRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCE-EERQVPTEAGR 914

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRER 176
            ::|:...:.|.|.|.....||.:..::|||.::.|.:|
Mouse   915 RLAQELGVSFGECSAALGHNILEPMMNLARSLKMQEDR 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 65/160 (41%)
Rab44NP_001351777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..140
Smc <152..>328 CDD:440809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..481
Atrophin-1 427..>745 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 724..779
Rab 788..944 CDD:206640 62/156 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.