DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RabX4 and rab40b

DIOPT Version :9

Sequence 1:	NP_733043.1	Gene:	RabX4 / 42960	FlyBaseID:	FBgn0051118	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	NP_001002524.2	Gene:	rab40b / 436797	ZFINID:	ZDB-GENE-040718-257	Length:	287	Species:	Danio rerio

Alignment Length:	177	Identity:	74/177 - (41%)
Similarity:	104/177 - (58%)	Gaps:	6/177 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 ALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAG 66
            |.||:  .|.|::|||:|||..|:....|......|...:|||:|...|.|||..:|||:|||:|
Zfish    18 AYDFL--LKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGIDYKTTTILLDGRRVKLQLWDTSG 80

  Fly    67 QERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRM 131
            |.||.|:..:|.|||.|::|:||:||..|::.:..|::.|.|:| |.|.|:|.||:... |.:|.
Zfish    81 QGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHA-PGVPKILVGNRLHL-AYKRQ 143

  Fly   132 VDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKI--REQRER 176
            |..|..:...|...:.|||||...|.||.::|..|||.:  |...||
Zfish   144 VTTEHTQAFVERLGVTFFEVSPLCNFNITESFTELARIVLMRHGMER 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RabX4	NP_733043.1	RAB	9..170	CDD:197555	68/160 (43%)
rab40b	NP_001002524.2	Rab40	17..194	CDD:133321	74/177 (42%)
		RAB	23..185	CDD:197555	68/163 (42%)
		SOCS_Rab40	195..237	CDD:239711
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810