DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab26

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:186 Identity:87/186 - (46%)
Similarity:129/186 - (69%) Gaps:8/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVLVLGDSNVGKTCIVHRYCDEKYYDTY-ISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            ||::||||.||||.::.|:.|.:|..:| :||:||||:.|::.:||..:||||||||||||||::
  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            |.||||.|..:||:|||||..:|:|:..||..|:|.|..|||.||.|||.:||.::|.|.:|.||
  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGE 343

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGD-------NFDNDESK 187
            ::....::||.|.|.|:.:|:|.:|.::||:::.:....||       :|..|.:|
  Fly   344 RLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDDGKFNVHDFVRDNTK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 82/160 (51%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 87/186 (47%)

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