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Protein Alignment RabX4 and Rab19
DIOPT Version :9
Sequence 1: | NP_733043.1 |
Gene: | RabX4 / 42960 |
FlyBaseID: | FBgn0051118 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261575.1 |
Gene: | Rab19 / 38930 |
FlyBaseID: | FBgn0015793 |
Length: | 219 |
Species: | Drosophila melanogaster |
Alignment Length: | 183 |
Identity: | 78/183 - (42%) |
Similarity: | 116/183 - (63%) |
Gaps: | 11/183 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAL------DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKL 59
||| ||: :|::::||...||||||.|:....|.:.:.:|||:||..|.|.::|..|||
Fly 10 MALPNEEHFDFL--FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKL 72
Fly 60 QIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCE 124
|||||||||||||:|.:|||.|.|:|::||:|...|::||..|:..::...:.:|:.:|.||||:
Fly 73 QIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCD 137
Fly 125 CSATQRMVDKERGEKIAENFDMPFF--EVSCKSNINIEDAFLSLARKIREQRE 175
.. .||.||.|...::.:......| |.|.|.|:|:||||..||.:::.|.:
Fly 138 LE-EQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHD 189
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RabX4 | NP_733043.1 |
RAB |
9..170 |
CDD:197555 |
72/162 (44%) |
Rab19 | NP_001261575.1 |
Rab19 |
19..184 |
CDD:133267 |
74/167 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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