DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RabX4 and Cracr2a

DIOPT Version :9

Sequence 1:	NP_733043.1	Gene:	RabX4 / 42960	FlyBaseID:	FBgn0051118	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	XP_006506404.1	Gene:	Cracr2a / 381812	MGIID:	2685919	Length:	751	Species:	Mus musculus

Alignment Length:	184	Identity:	63/184 - (34%)
Similarity:	112/184 - (60%)	Gaps:	2/184 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|::.:|||.||||..:.|.|:.::.....:|:|||::.|.:.:|...:.||:||||||||:|.:
Mouse   566 FKIVFVGDSAVGKTSFLRRLCEARFSPGMAATVGIDYRVKTVTVDNAQVALQLWDTAGQERYRCI 630

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            :..::|.|.|:.:|||:|..:|:.::..||.:::|.....:..:|.|||.: :..:|.|.:..||
Mouse   631 SQQFFRKADGVAVMYDLTAKQSFLSIRQWLSSVEEAVGDRIPVLLLGNKLD-NEKEREVPRGLGE 694

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRER-RGDNFDNDESKDKKS 191
            ::|:..::.|:|.|..|..|.:::.|.|||.::||.:. |.|.........|||
Mouse   695 QLAKENNLIFYECSACSGHNAQESLLHLARLLKEQEDTVRNDTIQVGPPAKKKS 748

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RabX4	NP_733043.1	RAB	9..170	CDD:197555	56/160 (35%)
Cracr2a	XP_006506404.1	PRK12309	<32..132	CDD:183426
		Smc	<142..>428	CDD:224117
		Rab	566..724	CDD:206640	54/158 (34%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900