DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX4 and RAB15

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001295083.1 Gene:RAB15 / 376267 HGNCID:20150 Length:212 Species:Homo sapiens


Alignment Length:226 Identity:81/226 - (35%)
Similarity:133/226 - (58%) Gaps:27/226 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||..:...:::|::|||.|||||::.|:.|.:::.::|||||:|||.|.|.:||:.:::||||||
Human     1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            ||||::|:|..|||.|.||.|:||:::..||.::..|:.::.|.|...|.|:|.|||.: ...:|
Human    66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKR 129

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLA-------RKIREQRERRGDN------FD 182
            .|.:|:|:::|:.:.|.|:|.|..:|:||:::|..|.       ||..|....|..|      .:
Human   130 QVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGLRMRASNELALAELE 194

  Fly   183 NDESKDKKSPGSNGLGTFSLGSLSGENRCTC 213
            .:|.|.:             |..:....|.|
Human   195 EEEGKPE-------------GPANSSKTCWC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 70/167 (42%)
RAB15NP_001295083.1 Rab15 9..172 CDD:206698 69/163 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 11/16 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..212 4/31 (13%)

Return to query results.
Submit another query.