DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab22a

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_063140363.1 Gene:Rab22a / 366265 RGDID:1311959 Length:201 Species:Rattus norvegicus


Alignment Length:159 Identity:56/159 - (35%)
Similarity:96/159 - (60%) Gaps:1/159 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74
            ||.:|||:.|||:.||.|:.::.:......|||..|..|.:.......|..|||||||||||.|.
  Rat     7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALA 71

  Fly    75 TAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGEK 139
            ..||||:...:::||:|..|:::.|..|:|.::::..|.:|..:|||||:.:..:.::::: .:.
  Rat    72 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERD-AKD 135

  Fly   140 IAENFDMPFFEVSCKSNINIEDAFLSLAR 168
            .|::....|.|.|.|:.|||.:.|:.:::
  Rat   136 YADSIHAIFVETSAKNAININELFIEISK 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 56/159 (35%)
Rab22aXP_063140363.1 None

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