DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab2

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:204 Identity:75/204 - (36%)
Similarity:128/204 - (62%) Gaps:11/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQ 67
            :.:...:|.:::||:.|||:|::.::.|:::...:..|||::|..::|.:||..|||||||||||
  Fly     1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65

  Fly    68 ERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMV 132
            |.||::|.:|||||.|.||:||:|..|::|:|:.||.:.:::::.::|.:|.|||.:.. ::|.|
  Fly    66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD-SRREV 129

  Fly   133 DKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQ---------RERRGDNFDNDESKD 188
            .||.||..|....:.|.|.|.::..|:|:||::.|::|.|:         .|..|.......|..
  Fly   130 KKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPT 194

  Fly   189 KKS-PGSNG 196
            ..| ||:.|
  Fly   195 NPSLPGAGG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 66/160 (41%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 75/204 (37%)

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