DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab9

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:184 Identity:65/184 - (35%)
Similarity:94/184 - (51%) Gaps:11/184 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74
            ||::|||..|||:.::.|:...:|.:....|||::|..|.|.:||....|||||||||||||.|.
  Fly    14 KVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQERFRALR 78

  Fly    75 TAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVK---VLAGNKCECSATQRMVDKER 136
            |.:|||:...||.|.:.:.:|...|..|.......|..|..|   ::.|||.:..|.:|.|..:.
  Fly    79 TPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVSSDA 143

  Fly   137 GEK-IAENFDMPFFEVSCKSNINIEDAFLSLARKIRE-------QRERRGDNFD 182
            .:: .||.......|.|.|:..|:.|||:...|:.|.       :..:.||..|
  Fly   144 VQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVAEAELRQHGDTID 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 61/163 (37%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 61/163 (37%)

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