DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab30

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:210 Identity:80/210 - (38%)
Similarity:130/210 - (61%) Gaps:6/210 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68
            |:...:|::::|::.|||||:|.|:....:.....:|||:||..|.:.::|..||||||||||||
  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67

  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVD 133
            |||::|.:|||.|..::|:||::...:::.|..|||.|||.|:..|:|:|.|||.:  ...|.:.
  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD--RDDREIP 130

  Fly   134 KERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARK-IREQRERRGDNFDNDESKDKKSPGSN-G 196
            .:.||:.|:..||.|.|.|.|...|:|..|..:|.: |.:.|.:.|.:.....:..::|.||: |
  Fly   131 TQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIG 195

  Fly   197 LGTFSLGSLSGENRC 211
            ||:||  :.:.::.|
  Fly   196 LGSFS--AKAAQSNC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 67/161 (42%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 68/166 (41%)

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