DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and RAB7B

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_796377.3 Gene:RAB7B / 338382 HGNCID:30513 Length:199 Species:Homo sapiens


Alignment Length:401 Identity:75/401 - (18%)
Similarity:119/401 - (29%) Gaps:163/401 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   502 DLDFIDTGSVQEVPDKETYRHTTSCSIHQFPERKASCKQQRIQRSKRSNESGGGSKRRKKLVRTR 566
            :|.|.|..|:|.|.|                  .|||..                     |:||.
Human   123 NLSFQDCESLQAVFD------------------PASCPH---------------------LLRTP 148

  Fly   567 KKSAADHSALSVGSGAGDSSAVVSRGCRSLGGTPVSLRRNQQDQELRTPTRGSPLTNRCNSLTFT 631
            .:..|: :.||......:.:..:.||.|       .:.|:.|::|..:.::............|.
Human   149 ARVLAE-AVLSFPLALTEVTLGIGRGRR-------VILRSYQEEEADSTSKAMVTETSIGEEDFQ 205

  Fly   632 EVHSLHSRILA---------ISESEKALLRADLEADVKYKQLIH-------EAESILFSMKSNSS 680
            ::|:...|.:.         :|.:|.|.|...:..||..:.:|.       :|..:|.::....|
Human   206 QLHAPEGRAVTFCLKEFRGLLSFAESANLPLTIHFDVPGRPVIFTVEDSLLDAHFVLATLLEQDS 270

  Fly   681 ICIKDLATVPPPLPPREPQPPPTPSLSKDTPVTSTTISSPRRVCNPPANKRVEMLRNCEADLKRE 745
             |.:||.:..|..|..:.||..||.....|                          |.:.|....
Human   271 -CSQDLCSPKPHQPVPQKQPHSTPHSDDFT--------------------------NDDIDCYMI 308

  Fly   746 LAKTCSQKCTDGAGNPAELNPAEGVIVNKRLEVLRYETSCSLSAPNSPKNTRVLLPRKTHVSNFI 810
            ..:|.       .||                |..|.:.|.||  |..|:.:              
Human   309 AMETT-------VGN----------------ESSRAQPSTSL--PPVPQAS-------------- 334

  Fly   811 HHQARPPCSPEALANDLKQSANLS--PPPPPPRRMIPKSPTIMRRRFRS-------------QSP 860
             |...||...|      ::.|..|  |..|||            ::|||             |.|
Human   335 -HDLAPPSEEE------EEEAEPSTVPGTPPP------------KKFRSLFFGSILAPIHSPQGP 380

  Fly   861 HLNIESDSDSD 871
            :..:..|||.:
Human   381 NPVLAEDSDGE 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555
RAB7BNP_796377.3 Rab 9..169 CDD:206640 16/85 (19%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82
Blue background indicates that the domain is not in the aligned region.

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