DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab9Fb

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:204 Identity:77/204 - (37%)
Similarity:122/204 - (59%) Gaps:9/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|:|||||..|||:|::.|:.|.::.:.::.|:|:||:.:.:.|.|..:.||||||||.|||::|
  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            ..:|||||.||||:||:|:.:|:.|:..||:.|:..:|..|..:|.||||: ....|.|..|:|.
  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCD-DLDNRQVRMEQGF 136

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDN--FDNDESKDKKSPGSNGLGTFS 201
            ..|.:..:.|:|||.||..|:.|.|..|:..|..:......|  ....|::|...|....:    
  Fly   137 NYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI---- 197

  Fly   202 LGSLSGENR 210
              :|:|::|
  Fly   198 --NLAGKDR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 69/160 (43%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 68/157 (43%)

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