DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab9Db

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster


Alignment Length:191 Identity:65/191 - (34%)
Similarity:101/191 - (52%) Gaps:12/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDG--VPIKLQIWDTAGQERFR 71
            :|:::||||.|||||::.|:.|.::.:.:..|:|:|.::..:....  :...||:|||:..|||:
  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDERFK 72

  Fly    72 TLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKER 136
            .|.....|.|.||||:||:|:.:|:.|:..|::.|:......|..:|.|||.: ....|.|...:
  Fly    73 LLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSD-DPNHRQVSMAQ 136

  Fly   137 GEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNF---------DNDESKD 188
            |...|....:.|.|||.||..|:.|.|.|||..|...|....:.|         |.:||.|
  Fly   137 GFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEEDAEESLD 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 58/162 (36%)
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 56/159 (35%)

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