DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RabX4 and Rab9Db

DIOPT Version :9

Sequence 1:	NP_733043.1	Gene:	RabX4 / 42960	FlyBaseID:	FBgn0051118	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	NP_572642.1	Gene:	Rab9Db / 31993	FlyBaseID:	FBgn0030221	Length:	197	Species:	Drosophila melanogaster

Alignment Length:	191	Identity:	65/191 - (34%)
Similarity:	101/191 - (52%)	Gaps:	12/191 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDG--VPIKLQIWDTAGQERFR 71
            :|:::||||.|||||::.|:.|.::.:.:..|:|:|.::..:....  :...||:|||:..|||:
  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDERFK 72

  Fly    72 TLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKER 136
            .|.....|.|.||||:||:|:.:|:.|:..|::.|:......|..:|.|||.: ....|.|...:
  Fly    73 LLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSD-DPNHRQVSMAQ 136

  Fly   137 GEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNF---------DNDESKD 188
            |...|....:.|.|||.||..|:.|.|.|||..|...|....:.|         |.:||.|
  Fly   137 GFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEEDAEESLD 197

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RabX4	NP_733043.1	RAB	9..170	CDD:197555	58/162 (36%)
Rab9Db	NP_572642.1	RAB	8..171	CDD:197555	58/163 (36%)
Rab9Db	NP_572642.1	Rab	8..167	CDD:206640	56/159 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR47980
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.020