DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab39

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster


Alignment Length:190 Identity:67/190 - (35%)
Similarity:112/190 - (58%) Gaps:8/190 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINL-DGVPIKLQIWDTAGQE 68
            |...::::::|||.|||:.::..:.|.|:.:....|:|:||..:||.: ||..||||:|||||||
  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70

  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPD-VVKVLAGNKCEC--SATQR 130
            |||::|.:|||.::|:||:||::|..|:.::..|:...|.:..|. .|..|.|.|.:.  :...|
  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLAR----KIREQRERRGDNFDNDES 186
            .|..|..:|.|:...:.|.|.|.:|..|:|:||..:.:    :||....:..|.:|..:|
  Fly   136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 61/168 (36%)
Rab39NP_572405.2 Rab39 8..218 CDD:133311 66/188 (35%)

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