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Protein Alignment RabX4 and Rab44
DIOPT Version :9
Sequence 1: | NP_733043.1 |
Gene: | RabX4 / 42960 |
FlyBaseID: | FBgn0051118 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006256215.1 |
Gene: | Rab44 / 309649 |
RGDID: | 1560150 |
Length: | 970 |
Species: | Rattus norvegicus |
Alignment Length: | 169 |
Identity: | 67/169 - (39%) |
Similarity: | 101/169 - (59%) |
Gaps: | 1/169 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
|.|:.|||||||||..:|....:.:.....:|:|:||:.|.:.:|.....||:||||||||:.:|
Rat 783 YHVIFLGDSNVGKTSFLHLLHHDSFAAGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSL 847
Fly 74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
|....|.|.|::||||||:.||:.::.|||..:|:.....|..||.|||.:|. .:|.|..|.|.
Rat 848 TRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKTDCE-EERQVPTEAGR 911
Fly 139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERR 177
::|:...:.|.|.|.....||.:..::|||.::.|.:|:
Rat 912 RLAQELGISFGECSAALGHNILEPMMNLARSLKMQEDRQ 950
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RabX4 | NP_733043.1 |
RAB |
9..170 |
CDD:197555 |
65/160 (41%) |
Rab44 | XP_006256215.1 |
RILP-like |
<185..311 |
CDD:304877 |
|
RAB |
783..944 |
CDD:197555 |
65/161 (40%) |
Rab |
785..941 |
CDD:206640 |
62/156 (40%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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