DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab-10

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_491857.1 Gene:rab-10 / 266836 WormBaseID:WBGene00004273 Length:201 Species:Caenorhabditis elegans


Alignment Length:184 Identity:100/184 - (54%)
Similarity:140/184 - (76%) Gaps:5/184 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|:|::|||.||||||::|:.|:.:..|:|||||||||.|.|.|.|..||||||||||||||.|:
 Worm    10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTI 74

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            ||:||||||||:|:||:||.:|::|::.|||||.|:||.||||::.||||:.| .:|:|.:||||
 Worm    75 TTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMS-DRRVVSRERGE 138

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSP 192
            |||::..:.|.|.|.|.|::::.||..||..|   ..:..|:.| ::|:|..:|
 Worm   139 KIAQDHGISFHETSAKLNVHVDTAFYDLAEAI---LAKMPDSTD-EQSRDTVNP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 94/160 (59%)
rab-10NP_491857.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 95/166 (57%)

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