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Protein Alignment RabX4 and RAB12
DIOPT Version :9
Sequence 1: | NP_733043.1 |
Gene: | RabX4 / 42960 |
FlyBaseID: | FBgn0051118 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020471.3 |
Gene: | RAB12 / 201475 |
HGNCID: | 31332 |
Length: | 340 |
Species: | Homo sapiens |
Alignment Length: | 162 |
Identity: | 71/162 - (43%) |
Similarity: | 108/162 - (66%) |
Gaps: | 2/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 KVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74
:|:::|...||||.::.|:.|:.:.:...||:|:|||.|.:.|.|..|:||||||||||||.::|
Human 140 QVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSIT 204
Fly 75 TAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGEK 139
:||||.|.||:|:||:|..|::::|..|::.|.:.||.|...:|.|||.:|. |.|.:.:::|||
Human 205 SAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCE-TDREITRQQGEK 268
Fly 140 IAENF-DMPFFEVSCKSNINIEDAFLSLARKI 170
.|:.. .|.|.|.|.|.|.|:::.||.|...|
Human 269 FAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 300
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RabX4 | NP_733043.1 |
RAB |
9..170 |
CDD:197555 |
70/160 (44%) |
RAB12 | NP_001020471.3 |
Rab12 |
139..340 |
CDD:206699 |
71/162 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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