DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab22a

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_077756.2 Gene:Rab22a / 19334 MGIID:105072 Length:194 Species:Mus musculus


Alignment Length:204 Identity:68/204 - (33%)
Similarity:111/204 - (54%) Gaps:17/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTLT 74
            ||.:|||:.|||:.||.|:.::.:......|||..|..|.:.......|..|||||||||||.|.
Mouse     7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALA 71

  Fly    75 TAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGEK 139
            ..||||:...:::||:|..|:::.|..|:|.::::..|.:|..:|||||:.:..:.::::: .:.
Mouse    72 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERD-AKD 135

  Fly   140 IAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSNGLGTFSLGS 204
            .|::....|.|.|.|:.|||.:.|:.::|:|              .|.| .:|.|.|.| |.|..
Mouse   136 YADSIHAIFVETSAKNAININELFIEISRRI--------------PSTD-ANPASGGKG-FKLRR 184

  Fly   205 LSGENRCTC 213
            ...|.:.:|
Mouse   185 QPSEPKRSC 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 57/159 (36%)
Rab22aNP_077756.2 Rab5_related 5..167 CDD:206653 58/174 (33%)
Effector region. /evidence=ECO:0000250 34..42 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..194 9/26 (35%)

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