DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab19

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:214 Identity:67/214 - (31%)
Similarity:126/214 - (58%) Gaps:13/214 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQ 67
            :|::  :||:::|||||||||:|..:....|.::..:|||:||..:.:.:||..:|:|:||||||
Mouse    14 VDYL--FKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76

  Fly    68 ERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMV 132
            |||||:|.:|||.|...::.||:|...::.::.:|:..|::..:.::|.:|.|||.:....:.::
Mouse    77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVL 141

  Fly   133 DKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKI--REQRERRGDNFDNDESKDKKSPGSN 195
            .::......::..:...|.|.|.:.||::.|:.:|:::  |......|::.....|:| .||   
Mouse   142 FEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGESAQQGLSQD-SSP--- 202

  Fly   196 GLGTFSLGSLSGEN-RCTC 213
                ..:..:..|: ||||
Mouse   203 ----VLVAQVPNESTRCTC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 55/160 (34%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 56/165 (34%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 11/14 (79%)

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