DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab10

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_057885.1 Gene:Rab10 / 19325 MGIID:105066 Length:200 Species:Mus musculus


Alignment Length:204 Identity:102/204 - (50%)
Similarity:140/204 - (68%) Gaps:15/204 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
            :|:|::|||.|||||::.|:.|:.:..|:|||||||||.|.:.|.|..||||||||||||||.|:
Mouse    10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTI 74

  Fly    74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
            ||:||||||||:|:||:||.:|:.|:|.|||||.|:|:.||.::|.||||:.. .:|:|.|.:||
Mouse    75 TTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMD-DKRVVPKGKGE 138

  Fly   139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSNGLGTFSLG 203
            :||....:.|||.|.|:|||||.|||:||..|..:             ...|.|.|..:...|.|
Mouse   139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILRK-------------TPVKEPNSENVDISSGG 190

  Fly   204 SLSG-ENRC 211
            .::| :::|
Mouse   191 GVTGWKSKC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 94/160 (59%)
Rab10NP_057885.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 95/163 (58%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 13/16 (81%)

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