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Protein Alignment RabX4 and Rab1a
DIOPT Version :9
Sequence 1: | NP_733043.1 |
Gene: | RabX4 / 42960 |
FlyBaseID: | FBgn0051118 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033022.1 |
Gene: | Rab1a / 19324 |
MGIID: | 97842 |
Length: | 205 |
Species: | Mus musculus |
Alignment Length: | 165 |
Identity: | 83/165 - (50%) |
Similarity: | 128/165 - (77%) |
Gaps: | 1/165 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 YKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQERFRTL 73
:|:|::|||.|||:|::.|:.|:.|.::||||||:|||.:.|.|||..||||||||||||||||:
Mouse 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
Fly 74 TTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDKERGE 138
|::|||||.||:::||||:.||:||:..||:.|...||.:|.|:|.||||:.: |:::||....:
Mouse 77 TSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLT-TKKVVDYTTAK 140
Fly 139 KIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQ 173
:.|::..:||.|.|.|:..|:|.:|:::|.:|:::
Mouse 141 EFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 175
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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