DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab-37

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001041294.1 Gene:rab-37 / 180696 WormBaseID:WBGene00004285 Length:223 Species:Caenorhabditis elegans


Alignment Length:191 Identity:82/191 - (42%)
Similarity:117/191 - (61%) Gaps:7/191 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VATYKVLVLGDSNVGKTCIVHRYCDEKYY-DTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQER 69
            :.|:||::||||..||||::.||.|..:. :.:|||:|||::.|||.:....:||||||||||||
 Worm    27 LTTFKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQER 91

  Fly    70 FRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVDK 134
            ||::||:|||.|..:||:||:.|..|:.|...||..|:|.....|...|.||||:   ..|.|..
 Worm    92 FRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCD---LPRAVPT 153

  Fly   135 ERGEKIAENFDMPFFEVSCKSNINIEDAFLSLAR---KIREQRERRGDNFDNDESKDKKSP 192
            :.|:::||.:.:||.|.|.|:..|::.|||.||.   |::......|:..|.....|.|.|
 Worm   154 DEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLKYGFVPGGEMADTISVADTKKP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 75/164 (46%)
rab-37NP_001041294.1 RAB 30..192 CDD:197555 75/164 (46%)

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