DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and aex-6

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_493376.1 Gene:aex-6 / 173223 WormBaseID:WBGene00000089 Length:215 Species:Caenorhabditis elegans


Alignment Length:207 Identity:79/207 - (38%)
Similarity:118/207 - (57%) Gaps:27/207 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLD---------GVPIKL 59
            |:....|.|.||||.||||..:|||.|..:...:|||:|||||:|.:...         |..:.|
 Worm     3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLL 67

  Fly    60 QIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENA---SPDVVKVLAGN 121
            |:||||||||||:||||::|.|||.:|::|:||.:|:.|:..||..::.:|   .||:  ::.||
 Worm    68 QLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDI--IICGN 130

  Fly   122 KCECSATQRMVDKERGEKIAENFDMPFFEVSCKSNINIE---DAFLSLARKIREQ---------R 174
            |.:.. .:|.|...|.:::|:...:|:||.|..::.|:|   |..|.|..:..:|         .
 Worm   131 KADLE-NRRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQRIQQSVETSSLPLS 194

  Fly   175 ERRGDNFDNDES 186
            |.||.:.|.|.|
 Worm   195 ECRGVSLDGDPS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 71/175 (41%)
aex-6NP_493376.1 Rab27A 4..182 CDD:206700 71/180 (39%)

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