DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and Rab26

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_038941050.1 Gene:Rab26 / 171111 RGDID:620890 Length:328 Species:Rattus norvegicus


Alignment Length:270 Identity:79/270 - (29%)
Similarity:125/270 - (46%) Gaps:101/270 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFV-ATYKVLVLGDSNVGKTCIVHRYCDEKYY-DTYISTIGIDFKQKLINLDGVPIKLQIWDTAG 66
            ||. ..:||:::|||.|||||::.|:.|..:. .|:|||:||||:.|::::||:.:|||||||||
  Rat    59 DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAG 123

  Fly    67 QERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQE----------NASPDVVKV---- 117
            |||||::|.||||.|.|      |::|.|.::....||:.|:          :.:|.:...    
  Rat   124 QERFRSVTHAYYRDAHG------VSSLLSVSSTVAALRHHQQRFLRQHPGLVDRNPGICPAGRGA 182

  Fly   118 ------------------------LAGNKCEC-----SATQRMVDKERGEKIA------------ 141
                                    ||..|..|     |..:|:|.:|.|||:|            
  Rat   183 HAVGEQGGNLGQSSPSWPHRACHGLALTKSLCLGQVDSTQERVVKREDGEKLAKVSQNREGEEGL 247

  Fly   142 ---------------------ENFDMPFFEVSCKSNINIEDAFLSLARKIRE------------- 172
                                 :.:.:||.|.|.||.:|::.||.::|:::::             
  Rat   248 LEIVTLGPPPYAQHLAGSSYLQEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFRL 312

  Fly   173 ----QRERRG 178
                :||.||
  Rat   313 HDYVKREGRG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 73/237 (31%)
Rab26XP_038941050.1 P-loop containing Nucleoside Triphosphate Hydrolases 65..326 CDD:476819 77/264 (29%)

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