DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab8b

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001092729.1 Gene:rab8b / 100093706 ZFINID:ZDB-GENE-070620-16 Length:209 Species:Danio rerio


Alignment Length:198 Identity:100/198 - (50%)
Similarity:144/198 - (72%) Gaps:10/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||..:...:|:|::|||.|||||::.|:.::.:..|:|||||||||.:.|.|||..|||||||||
Zfish     1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|||||||||||:|:||:||.:|::|:..|:|||:|:||.||.:::.||||:.: .:|
Zfish    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN-DKR 129

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSN 195
            .|.||||||:|.::.:.|.|.|.||:.|:|:||::|||.|..:..|:         .::.:|...
Zfish   130 QVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTRLNRK---------MNENNPSGG 185

  Fly   196 GLG 198
            |.|
Zfish   186 GGG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 93/160 (58%)
rab8bNP_001092729.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 94/166 (57%)

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