DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX4 and rab8b

DIOPT Version :10

Sequence 1:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001090677.1 Gene:rab8b / 100036650 XenbaseID:XB-GENE-480278 Length:207 Species:Xenopus tropicalis


Alignment Length:196 Identity:100/196 - (51%)
Similarity:143/196 - (72%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65
            ||..:...:|:|::|||.|||||::.|:.::.:..|:|||||||||.:.|.|||..|||||||||
 Frog     1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130
            |||||||:|||||||||||:|:||:||.:|::|:..|:|||:|:||.||.:::.||||:.: .:|
 Frog    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMN-DKR 129

  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKDKKSPGSN 195
            .|.:|:|||:|.::.:.|.|.|.||:||:|:||.:|||.|..:..|:        ..:..|||..
 Frog   130 QVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRK--------MNESISPGGG 186

  Fly   196 G 196
            |
 Frog   187 G 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX4NP_733043.1 RAB 9..170 CDD:197555 92/160 (58%)
rab8bNP_001090677.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 93/166 (56%)

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