DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and HERC1

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_016878188.1 Gene:HERC1 / 8925 HGNCID:4867 Length:4909 Species:Homo sapiens


Alignment Length:488 Identity:118/488 - (24%)
Similarity:194/488 - (39%) Gaps:82/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 HAQTVLGTPYYFSPEMCEGKEYDNKSDIWA-LGCILGEMCCLKKTFAASNLSELVTKIMAGNYTP 323
            |.|..|..|..::|            :.|| |.|.   ...:|...|.:|.::........:..|
Human  3956 HHQNCLPDPASWNP------------NEWAWLECF---STTIKAAEALTNGAQFPESFTVPDLEP 4005

  Fly   324 VPSGYTSGLRSLMSNLLQVEAPRRPTASEVLVYWI---PLIFRSLGKNKGYSYEDDVGGPGSDQL 385
            ||.   ..|..||.|...:..     ..|.::.|.   |..:...||...|.:    |.....||
Human  4006 VPE---DELVFLMDNSKWING-----MDEQIMSWATSRPEDWHLGGKCDVYLW----GAGRHGQL 4058

  Fly   386 TAPVPAAAYSNVSMELELPTAQTETKQLMIADTAAPHEILEKRSVLYQLKAFGTCFS-------- 442
                 |.|..||.    :|.|.....|        ..:::..::..:.::|.||..:        
Human  4059 -----AEAGRNVM----VPAAAPSFSQ--------AQQVICGQNCTFVIQANGTVLACGEGSYGR 4106

  Fly   443 --------------MAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWK 493
                          ::.:|......:|....||.|.:.:.|.|..::||:|.:|:||....:..:
Human  4107 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR 4171

  Fly   494 HYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVR 558
            . |.::|:::...||....|...:.:||..|.|.:.|:..:..||.....|...|:.:..|...:
Human  4172 R-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQ 4235

  Fly   559 VEQVAAGLQHVLALSREGA-VYVWGTSTCGALGLGNYQQQQKFPQKI-LLSHVKTKPSKIYCGPD 621
            :.|||.||.|.||:|.:|: |:.:|....|.||||| ...:..|||| :|..:..|  |:.||..
Human  4236 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN-STAKSSPQKIDVLCGIGIK--KVACGTQ 4297

  Fly   622 TSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHK----VTQACFSSTHSVFLVEGGYV 682
            .|..|..:|.::..|.:  ..:|..........:..|:|..    :......:.|::.|...|.|
Human  4298 FSVALTKDGHVYTFGQD--RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDV 4360

  Fly   683 YTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYI 715
            |..|.|:|||.|:.|.|.|..||||..::.:.:
Human  4361 YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNV 4393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 21/102 (21%)
S_TKc 105..354 CDD:214567 20/94 (21%)
ATS1 445..747 CDD:227511 80/277 (29%)
HERC1XP_016878188.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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