DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and HERC2

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_004658.3 Gene:HERC2 / 8924 HGNCID:4868 Length:4834 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855
S_TKc 105..354 CDD:214567
ATS1 445..747 CDD:227511
HERC2NP_004658.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..88
RCC1 1-1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 415..461
RCC1 1-2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 462..512
RCC1 1-3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 513..568
RCC1 514..566 CDD:278826
RCC1 1-4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 569..620
RCC1 569..620 CDD:278826
RCC1 1-5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 623..674
RCC1 623..672 CDD:278826
RCC1 1-6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 675..726
RCC1 675..724 CDD:278826
RCC1 1-7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 728..778
Cyt-b5 1209..1282 CDD:278597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1555..1575
MIB_HERC2 1870..1929 CDD:284184
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1933..1958
UBA_HERC2 2460..2507 CDD:270585
Cul7 2554..2631 CDD:288381
ZZ_HERC2 2706..2750 CDD:239084
APC10-HERC2 2765..2910 CDD:176485
RCC1 2-1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 2958..3009
RCC1 2960..3007 CDD:278826
RCC1 2-2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3010..3064
RCC1 3010..3062 CDD:278826
RCC1 2-3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3065..3116
RCC1 3065..3114 CDD:278826
RCC1 3117..3168 CDD:278826
RCC1 2-4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3118..3168
RCC1 2-5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3171..3222
RCC1 3171..3220 CDD:278826
RCC1 3223..3272 CDD:278826
RCC1 2-6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3224..3274
RCC1 2-7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3275..3326
RCC1 3275..3324 CDD:278826
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3602..3629
RCC1 3-1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 3951..4002
RCC1 3-2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4004..4056
RCC1_2 4039..4069 CDD:290274
RCC1 4057..4106 CDD:278826
RCC1 3-3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4058..4108
RCC1 3-4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4110..4162
RCC1 4110..4160 CDD:278826
RCC1 4163..4212 CDD:278826
RCC1 3-5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4164..4214
RCC1 4215..4263 CDD:278826
RCC1 3-6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4216..4266
RCC1 4267..4316 CDD:278826
RCC1 3-7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00235, ECO:0000269|Ref.21 4268..4318
HECTc 4421..4792 CDD:238033
HECTc 4464..4790 CDD:214523
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4804..4834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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